GEBA - Project

gebaSpike: Python Spike Sorting Package (Tint/Axona Data) Draft

If you are recording electrophysiology data, you will at one point likely have to perform some spike sorting. Spike sorting is when the user distingu…

Python Axona Electrophysiology Neuroscience

Published by Geoff, 5 years, 5 months ago.

BinMSGUI - Sorting Axona Data with MountainSort Draft

BinMSGUI¹ is a Python Graphical User Interface (GUI) that I developed in order to test MountainSort's^2,3 (MS) spike sorting algorithm. We use Axona's…

Python Axona MountainSort Electrophysiology Neuroscience

Published by Geoff, 5 years, 4 months ago.

BinConverter Draft

BinConverter is a Python Graphical User Interface (GUI) that converts the raw data (.bin) recorded from Axona's DacqUSB¹ to the Tint format. Although…

Python Axona Electrophysiology Neuroscience

Published by Geoff, 5 years, 7 months ago.

MountainSort with Windows 10 Draft

Our lab has been using MoutainSort/MountainLab¹ as a spike sorting algorithm (previously used KlustaKwik). In the referenced Neuron paper, Chung et a…

MountainSort Electrophysiology Neuroscience

Published by Geoff, 5 years, 7 months ago.

BatchTINTV3 - Batch Spike Sorting Solution for Tint Draft

A few years ago (starting in May of 2016) I was tasked with optimizing the way electrophysiology (ephys) data is sorted in the lab. If you happen to …

Python Axona Electrophysiology Neuroscience

Published by Geoff, 5 years, 7 months ago.

hfoGUI: Tint LFP Data Visualization Draft

hfoGUI is a Python package that was originally designed so that I could visualize High Frequency Oscillations (HFO's) within the in-vivo electrophysi…

Python Axona Electrophysiology Neuroscience

Published by Geoff, 5 years, 7 months ago.